Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANL----GP---GFD---SCGLALTLYLTLDIGA-EADSWYIEHNIGGGIPHDETNVIIETALNLAPN---LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLF-PDCALIAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 2V8P Chain:A ((5-269)) | IKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREGV---LRVETN-I-GIP-QEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISA---DAPFFLLGKSAIGRGKGEV--LEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFV-----TPEYAEEKIQRIISGEVEEIENVL-GDIA-----RELYPEINEVYRFVEYLG-FKPFVSGSGSTVYFFGGASEE--LKKAAKMR--GWKVVEL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181771 for 2060 contacts (-88.2/contact) +
2D Compatibility (PS) -27475 + (NN) -10660 + (LL) 2088
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -231118.0 ( -112.19 by residue)
QMean score : 0.465
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