Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDN-------G-D------GLA----F---------NKLPSNT-------------PQL---DYFI--DKKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
| 3V48 Chain:A ((12-263)) | ------------------------------------YADAPVVVLISGLGGSGSYWLPQLAVLE-Q-EYQ--VVCYDQRGTGNNPD---------TL-------AEDYSIAQMAAELHQALVAAG----IEHYAVVGHALGALVGMQLALDYPA-----SVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICA------SDDLLVPTACSSELHAALPD-S---QKMVM--PYGGHACNVTDPETFNALLLNGLASLLHH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27485 for 1649 contacts (-16.7/contact) +
2D Compatibility (PS) -21272 + (NN) -8194 + (LL) 5080
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -56671.0 ( -34.37 by residue)
QMean score : 0.362
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