Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLSLLKQDGTNAG-EITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKV-----KNRSEVRGGGRKPWR-----QKGTGRARQGSIRSPQWRGGGVVFGPTP--RSYAYKLPKKVRRLAIKSILSSKV---------------NEEKLVVLEGLTFDAPKTKEFAAFLKNISVDT---------------------------KALIVVAGESENVELSARNLQGITVIPAESISVLEVAK----HDKLIITKAAVEKVEEVLA |
| 2WWB Chain:H ((3-263)) | RPQVTVHSLTGEATANALPLP-AVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGA--FGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLE-SIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYA-EDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28859 for 1311 contacts (-22.0/contact) +
2D Compatibility (PS) -21713 + (NN) -7890 + (LL) 188
1D Compatibility (HY) -8400 + (ID) 2950
Total energy: -69624.0 ( -53.11 by residue)
QMean score : 0.438
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