Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQT-FP-TGLKLDGYGVALPHTDPEC-VTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETIAV
2OQ3 Chain:A ((1-146))
MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYIL---APGVAMPHARPECGALKTGMSLTLLEQGVYFPGND-----EPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISR---
General information:
TITO was launched using:
RESULT:
Template:
2OQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106246 for 1158 contacts (-91.7/contact) +
2D Compatibility (PS) -15569 + (NN) -8890 + (LL) 772
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -138533.0 ( -119.63 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2OQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQ3-query.scw
PDB file :
Tito_Scwrl_2OQ3.pdb
: