Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIMLVCSAGM-STSLLVTKMEKAAEAQGIEAKIFAVAEAEA--ANHLDEIDVLLLGPQVRFLEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK
3F6R Chain:A ((2-59))
-SKVLIVFGSSTGNTESIAQKLEELIAAGGHEV--TLLNAADASAENLADGYDAVLFGCSA-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32346 for 342 contacts (-94.6/contact) +
2D Compatibility (PS) -6005 + (NN) -1486 + (LL) 3636
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -38501.0 ( -112.58 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3F6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6R-query.scw
PDB file :
Tito_Scwrl_3F6R.pdb
: