Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDE--WSPHVSMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHT-FAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3LA7 Chain:A ((36-234))
----------------------MATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYE------AGEEITVALLRENSVFGVLSLLTGNKSDRFY-HAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHK----
General information:
TITO was launched using:
RESULT:
Template:
3LA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75000 for 1472 contacts (-51.0/contact) +
2D Compatibility (PS) -21482 + (NN) -13421 + (LL) 3796
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -114307.0 ( -77.65 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_3LA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA7-query.scw
PDB file :
Tito_Scwrl_3LA7.pdb
: