Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIAAFDIGGTALKMGVVLPHGEIILT-KSAEISGSDG--DQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAF----RPGKYTLNETTTMLV-LRRQYAELTGR-----------PLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEENRHE |
3VGK Chain:C ((7-269)) | -----VDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAV-AGASEGHDVEAVGIGAAGYVDDKRATVLFAPNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150157 for 1879 contacts (-79.9/contact) +
2D Compatibility (PS) -26400 + (NN) -17032 + (LL) 4336
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -204253.0 ( -108.70 by residue)
QMean score : 0.382
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