Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVGSLVEMKKPH---------ACVIKETGKKANQWKVLRVGADIKIQCTNCQHVIMMSRYDFERKLKKVLQP
3TZE Chain:A ((226-266))
-KEIAPCFSSSFRFIGKGAMCLVPA-------AVDQDPFFRLARDKAKALGEKKPSSIYVSLLPDLKGVNRKMS
General information:
TITO was launched using:
RESULT:
Template:
3TZE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9055 for 134 contacts (-67.6/contact) +
2D Compatibility (PS) -3100 + (NN) 323 + (LL) 716
1D Compatibility (HY) 0 + (ID) 150
Total energy: -11266.0 ( -84.07 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_3TZE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZE-query.scw
PDB file :
Tito_Scwrl_3TZE.pdb
: