Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIAIDAMGGDYAPKAIV-----EGVNQAISDFSD---IEVQLYGDQKKIEKYLTVTERVSIIHTEEKINSDDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAGNTGALL-AAGLFVVGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANAE-NTASHLHQYAILGSFYAKNVR--GIEVPRVGLLNNGTEETKGD-SLHKEAYELLAAEPSINFIGNIEARDLMSSVADVV---VTDGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
3TNG Chain:A ((5-291)) | TKSRFFSDVAETSSFVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKTL--TANESVTWIQTDT---------------AEAAAQGAILAVKNKEADILVKGFIPTATLMHH---VLKKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIGITNPKIALLSA-VEEVTAKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAP-------------------NIETGNALYKSLVYFAG------AKVGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVEK------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -62196 for 2251 contacts (-27.6/contact) +
2D Compatibility (PS) -28783 + (NN) -8615 + (LL) 2988
1D Compatibility (HY) -2000 + (ID) 2700
Total energy: -101306.0 ( -45.00 by residue)
QMean score : 0.323
|
|
|