Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAIDAMGGDYAPKAIV-----EGVNQAISDFSD---IEVQLYGDQKKIEKYLTVTERVSIIHTEEKINSDDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAGNTGALL-AAGLFVVGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANAE-NTASHLHQYAILGSFYAKNVR--GIEVPRVGLLNNGTEETKGD-SLHKEAYELLAAEPSINFIGNIEARDLMSSVADVV---VTDGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE
3TNG Chain:A ((5-291))TKSRFFSDVAETSSFVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKTL--TANESVTWIQTDT---------------AEAAAQGAILAVKNKEADILVKGFIPTATLMHH---VLKKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIGITNPKIALLSA-VEEVTAKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAP-------------------NIETGNALYKSLVYFAG------AKVGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVEK-------------


General information:
TITO was launched using:
RESULT:

Template: 3TNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62196 for 2251 contacts (-27.6/contact) +
2D Compatibility (PS) -28783 + (NN) -8615 + (LL) 2988
1D Compatibility (HY) -2000 + (ID) 2700
Total energy: -101306.0 ( -45.00 by residue)
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_3TNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNG-query.scw
PDB file : Tito_Scwrl_3TNG.pdb: