Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGIVSNDNGKLYGYRNV-GLLSEVFKNQSELDNLTGNAAIGHVRYATAGSADIRNIQPFLYKFHDGQFALCHNGNLTNAISLRKEL-EKQGAIFNASSDTEILMHLIRRS-----HNPSFMGKVKEALST----VKGGFAYLLMT-EDKLIAALDPNAFRPLSIGQM----QNGAWVISSETCAFEVVGAKWVRDVEPGEVILIDDSGIQCDRYTDETQLA-ICSMEYVYFARPDSTIHGVNVHTARKNMGKRLAQEFKQ-----DADIVIGVPNSSLSAAMGFAEESGLPNEMGLVKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSIVRGTTSRRIVGLLREAGASEVHVAIASPELKYPCFYGIDIQTRRELISANHAADEVCDIIGADSLTYLSLDGLIESIGLETKAPNGGLCVAYFDGHYPTPLYDYEEEYLRSLEEKTSFYIQKVK |
1ECB Chain:C ((1-479)) | -----------CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEAR-HMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYG-ITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFEC-SVFNGVYVTK--DVDQGYLDFLDTLR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273136 for 4060 contacts (-67.3/contact) +
2D Compatibility (PS) -48745 + (NN) -15997 + (LL) 2280
1D Compatibility (HY) -37200 + (ID) 9400
Total energy: -382198.0 ( -94.14 by residue)
QMean score : 0.457
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