Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQ---FIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKG-YT-PGSFFANGQGGDQGPRAFFANLYSAPITDKEVTKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGDL--YKGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 3UOR Chain:A ((27-414)) | -----------------------------------KTTVRFWAMGK---E------AEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARSKIVDPADYFPGVWDTN-LVDGTLYGVPWYVDTRLLFYRKDLLREAGYSQ-MPK--TWAEMEQVMAAIKRKVGPDRYAILMPL--NEFEQQLSFA-LQQDDRLLRDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGNWGTAPLPGPNGLGAGIAGGSSLVIFKS--SQHKDASWKLIEYLSQPQVQ-ARFHAIIGDLPPRRSTWKLPSLANDALAHAFGDQLER-VKATPKVLEWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKRRW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50063 for 3285 contacts (-15.2/contact) +
2D Compatibility (PS) -40775 + (NN) -11931 + (LL) 3604
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -113565.0 ( -34.57 by residue)
QMean score : 0.439
|
|
|