Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLT-----EGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHLSD----------GDFQDLASTTALIADVAKAHGDEI-------SRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVFAQHENQAGMLGAYYHFKNRG |
1Z05 Chain:A ((108-416)) | -WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEI-DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQM-PHY-NVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQATMPGAALIKQALY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205565 for 2452 contacts (-83.8/contact) +
2D Compatibility (PS) -30504 + (NN) -8118 + (LL) -40
1D Compatibility (HY) -20800 + (ID) 2800
Total energy: -267827.0 ( -109.23 by residue)
QMean score : 0.512
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