Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNY-YEIHVYG------ANSGAINSTG--SLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
1MOL Chain:A ((1-94)) | --------------------------------------------------------------------------------------------------------GEWEIIDIGPFTQNLGKFAVDEENKI--------GQYGR---LTFNKVIRPCMKKTIYEN---------------EREIKGYEYQLYVYASDKLFRADISEDYKTRGRKLLRFNGPVPPP-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3569 for 519 contacts (-6.9/contact) +
2D Compatibility (PS) -8604 + (NN) 642 + (LL) 11376
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -5455.0 ( -10.51 by residue)
QMean score : 0.254
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