Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSA-----------AFNKLLP--EVQL--DAAVSRNFSKSFD--IFENRIQNKALS-KIVVLAVGVNSLDN--------YKTDLSQFIKSLP-KGHRLIIVTPYNAKN--------MSQVTTVRDYELSLMKKYNYITVADWYKVATEH----------PEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
2O14 Chain:A ((160-365)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRNDGQLEAILKY-IKPGDYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILSTPQGRATDFTSEGIHSSVNRWYRASILALAEE-EKTYLIDLNVLSSAYFTSIGPERTLGLY-MDGDTLHPNR-A--GADALARLAVQELKRQGIAGF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72995 for 1270 contacts (-57.5/contact) +
2D Compatibility (PS) -17362 + (NN) -3109 + (LL) 35732
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -63884.0 ( -50.30 by residue)
QMean score : 0.459
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