Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANVKLFDQTGKEVS-SVELNEAIFGIEPNESVVFDVVISQRASLRQGTHAV-----KNRSAVSGGGRKPWR-----QKGTGRARQGSIRSPQWRGGGVVFGPTP--RSYGYKLPQKVRRLALKSVYSAKV---------------AEDKFVAVENLSFAAPKTAEFASVLSALSIDS---------------------------KVLVILEEGNEFAALSARNLPNVTVATATTASVLDIVN----ADKLLVTKEAISTIEGVLA |
2WWB Chain:H ((3-263)) | RPQVTVHSLTGEATANALPLP-AVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGA--FGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLE-SIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYA-EDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37851 for 1311 contacts (-28.9/contact) +
2D Compatibility (PS) -21669 + (NN) -4644 + (LL) 644
1D Compatibility (HY) -6000 + (ID) 2600
Total energy: -72120.0 ( -55.01 by residue)
QMean score : 0.452
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