Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
2ORI Chain:B ((1-216))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLVNVNGQRDIQDVYADVKDLLGGLK
General information:
TITO was launched using:
RESULT:
Template:
2ORI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68824 for 1668 contacts (-41.3/contact) +
2D Compatibility (PS) -23193 + (NN) -13079 + (LL) 204
1D Compatibility (HY) -22800 + (ID) 6200
Total energy: -133892.0 ( -80.27 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2ORI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORI-query.scw
PDB file :
Tito_Scwrl_2ORI.pdb
: