Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEIEGKVVETMPNAMFTVELE---NGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK
1T9H Chain:A ((12-63))
---------EGKIIKALSGFYY-VLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQAENDKEGYLMEIKERT
General information:
TITO was launched using:
RESULT:
Template:
1T9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27385 for 263 contacts (-104.1/contact) +
2D Compatibility (PS) -5433 + (NN) -1532 + (LL) 1200
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -36750.0 ( -139.73 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1T9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T9H-query.scw
PDB file :
Tito_Scwrl_1T9H.pdb
: