Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLD---DYIAYRDTLTKVEETLSDIDKEKFEK-LISGERFAGKKQFIRDIQPFFNAFKAD
1OR7 Chain:A ((20-164))
-KAFNLLVVRYQHKVASLVSRYVP-SGDVPDVVQEAFIKAYRALDSFRG----DSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGA--------NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFR
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20391 for 735 contacts (-27.7/contact) +
2D Compatibility (PS) -13511 + (NN) -996 + (LL) 920
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -36628.0 ( -49.83 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: