Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKITTSLFQEMVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDY----IISGG--------------------------QTMNPSTEDIVKAIEKV--NARNVIILPNNKNI---FMAAQSAADVVD-----IPAAVVETRTV--PQGFTSLLA---FDPAKSLETNVADMTNSLSDVISGSVTLAVRDTTIDGLEIHE----NDILGMV-DGKILVSTPDME--KALKDTFDKMIDE-DSEIVTIYVGEDGKQALAETLSEYLEETYEDVEVEIHQGDQPVYPYLMSVE |
| 3PL5 Chain:A ((36-299)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFKILTDSTADLPESWTQENDVQVLGLTVQLDGITYETVGPDRLTSRVLLEKIAAGSKPTTSQVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLAATGGEGYLAMLAAQAREEGKSLKETKELILDVGPRLRT-FFLVDNLYHLMRGGRLS-LVNIKPLLWLDASGKLVPIAKLRGRKKGMKEMLKRATADVAHDTAVVAYANDS--EAAENLKEQLLANEKIKNVVTLPLGPVISTHVGPNT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74614 for 1483 contacts (-50.3/contact) +
2D Compatibility (PS) -23052 + (NN) -16489 + (LL) 23356
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -96799.0 ( -65.27 by residue)
QMean score : 0.417
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