Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHILWEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISK-I-YEISNNNIHAGVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLDMTKTHFYNPSGAVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYEETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQDGEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVKPKKEVTKTKTKSIQEQPQTK-EQWWTKTDQFIQSHFVSILIVLGTIAILCLLAGIVLLIKRSR |
3ITA Chain:A ((7-300)) | ---------------------------------------EAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVA-GSQESFIGLMNGYAKKLGLTNTTFQTVHGLDA---------------PGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNK-----IRQPNRNRLLWS---SNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTD------RIRFNESEKLLTWGFRFFETVTPIKP-DATFV-TQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60278 for 2475 contacts (-24.4/contact) +
2D Compatibility (PS) -31040 + (NN) -11438 + (LL) 4052
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -111104.0 ( -44.89 by residue)
QMean score : 0.461
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