Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKIL---------PFTHNKQIKVGPLDNLGRAT-YSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMNNV----------PENLVTMTKYLNTGFSENNPDGMLYYE-----NRLDSWLANHKNFWLDYKVTP---IYEGNNLVPSRVE-LQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTS-------PLAKIDYK------TGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 1CJD Chain:A ((15-383)) | LRNQQAMAANLQARQIVLQQS--YPVIQQVETQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAVALTDFGPANLVQRVIYYDPDN-----QRHTETS-GWHLHFVNTAKQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTMYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG-QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRYLSTIAVFDNGGSFNAGTD-INYLSQRTANFSDTRKLDPKTWAAQTRRRIATDFPKG-VYYCDNRDKPI---YTLQYGNVGFVVNPKTVNQNARLLMGYEYFTSR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1CJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 121179 for 2407 contacts (50.3/contact) +
2D Compatibility (PS) -33169 + (NN) 5775 + (LL) 1364
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: 83049.0 ( 34.50 by residue)
QMean score : 0.058
|
|
|