Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKR---PYRYDYGQFTFLKIYQAGF-ESAAHPFSISGGHD-RVIFLTVKAS--GDYTKSIYKQLKVGTKIALDRAYGHMLFDK-DKKEQVWIAGGIGITPFISFIRENSIL--TKRVDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSSL------------QGRLDFSQS---VFEGQPTIFMCGPTSMTSTYAKVFRQKD-AKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 1GVH Chain:A ((151-394)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133838 for 1736 contacts (-77.1/contact) +
2D Compatibility (PS) -23294 + (NN) -493 + (LL) 21408
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -144417.0 ( -83.19 by residue)
QMean score : 0.522
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