Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQS-DDYKGMGTTIEAVAIV--GDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV
2J82 Chain:A ((1-240))
MDVAGLTDCGLIRKSNQDAFYIDEK--HQRFFIVADGM---AGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAF-AANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQA----------------RHVLSQCLGREDLSQIDIQPIDLEPGDRLLLCSDGLTEELTDDVISIYLSEP-NVQKAAAALVDAAKTHGGRDNVTVVVISV-----
General information:
TITO was launched using:
RESULT:
Template:
2J82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108592 for 1959 contacts (-55.4/contact) +
2D Compatibility (PS) -23004 + (NN) -7046 + (LL) 1764
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -150578.0 ( -76.86 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2J82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J82-query.scw
PDB file :
Tito_Scwrl_2J82.pdb
: