Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGI-KSKIIESELQAINFQ--DLASKISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
3C1D Chain:A ((15-161)) | -------------------------------------------------------------------------------------------------------------LDRAVRILAVRDHSEQELRRKLAAP--ATAEDYERVIAWCHEHGYLDDSRFVARFIASRS---RKGYGPARIRQELNQKGISREATEKAMREADID-----WAALARDQATRKYGEPL--PTVFSEKVKIQRFLLYRGYLMEDIQDIW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11549 for 907 contacts (-12.7/contact) +
2D Compatibility (PS) -14070 + (NN) -6884 + (LL) 10036
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -23917.0 ( -26.37 by residue)
QMean score : 0.596
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