Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGR-DVTFEEYLVHILKHFEQNQDSIATLLLSDDPYFLLRFRSELEHDVYPR-LREEYI-TK--VDIPEDFLKQFLLSSFIETLKWWLHQRQKMTVEDLLKYYLTMVER
2IU5 Chain:A ((1-171))
---MEKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDK-NFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGN--SLEKLYSQIVNLLLA
General information:
TITO was launched using:
RESULT:
Template:
2IU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95285 for 1144 contacts (-83.3/contact) +
2D Compatibility (PS) -17649 + (NN) -9246 + (LL) 596
1D Compatibility (HY) -11600 + (ID) 1750
Total energy: -134934.0 ( -117.95 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2IU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU5-query.scw
PDB file :
Tito_Scwrl_2IU5.pdb
: