Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSP-GDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
3D82 Chain:A ((3-99))
--------QTKVINFNDKFSLFNQHWSPRVIAEMNDYQFKLVKV--EGEFVWHEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKEECKIMIIEPR---
General information:
TITO was launched using:
RESULT:
Template:
3D82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71115 for 600 contacts (-118.5/contact) +
2D Compatibility (PS) -9823 + (NN) 4373 + (LL) 1388
1D Compatibility (HY) -10800 + (ID) 900
Total energy: -86877.0 ( -144.79 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_3D82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D82-query.scw
PDB file :
Tito_Scwrl_3D82.pdb
: