Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTFEENLQELETIVSRLETGDVALEDAIAEFQKGMLISKELQRTLKEAEETLVKVMQADGTEVEMDT
1UFI Chain:A ((3-50))
HMPVPSFGEAMAYFAMVKRYLTSFP---------------IDDRVQSHILHLEHDLVHVTRKN--------
General information:
TITO was launched using:
RESULT:
Template:
1UFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2787 for 227 contacts (-12.3/contact) +
2D Compatibility (PS) -5366 + (NN) -3858 + (LL) 2128
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -13533.0 ( -59.62 by residue)
QMean score : 0.763
(partial model without unconserved sides chains):
PDB file :
Tito_1UFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UFI-query.scw
PDB file :
Tito_Scwrl_1UFI.pdb
: