Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQETHQLTIVHLEARDIDRPNPQLEIAPKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLP-DGIYYGLAVKAGEKNRN------VSAFLVDLSEDKVIY-----PKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIR-----VKN-----------------------------------------------------GVHSQDID----AAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENKKVPTPKVPSRGGLIPKTGEQQAMALVIIGGILIALALRLLSKHRKHQNKD |
| 2XTL Chain:A ((179-422)) | ---------------------------------------------------------DETVDAVFTLQVKDGDKWV-------N----------VDSAKATAATSFKHTFENLDNAKTYRVIERVS--GYAPEYVSFVNGVVTIKNNKDSNEPTPINPSEPKVVTYGRKFVKTNKDG--KERLAGATFLVKKDGKYLARKSGVATDAEKAAVDSTKSALDAAVKAYNDLTKEKQEGQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQFEITGLTEGQYSLEETQAPTGYAKLSGDVSFNVNATSYSKGSAQDIEYTQGSKTKDAQQVINKKVT------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 5559 for 966 contacts (5.8/contact) +
2D Compatibility (PS) -17603 + (NN) 1696 + (LL) 7812
1D Compatibility (HY) 2800 + (ID) 1500
Total energy: -1236.0 ( -1.28 by residue)
QMean score : 0.308
|
|
|