Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLS---RNPLLIDPFTSKQKE-GLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
| 3TBE Chain:B ((16-214)) | ---------------------------------------------NINAFKEAVTKIDRVEINRRLELAYAYNASIAGAK--PALKDPY--EQKQA-VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98138 for 1490 contacts (-65.9/contact) +
2D Compatibility (PS) -19906 + (NN) -4824 + (LL) 9800
1D Compatibility (HY) -20800 + (ID) 5900
Total energy: -139768.0 ( -93.80 by residue)
QMean score : 0.529
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