Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDVKADGADFAKIAKEKTTATD---KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 2KGJ Chain:A ((4-96)) | --------------------------------------------------------------------------------------------------------------------------------------------------QRTRYSIIQTKTEDEAKAVLDELN-KGGDFAALAKEKSADIISARNGGDMGWLED--ATIPDELKNAGLK-EKGQLSGVIKSSV------GFLIVRLDDIQAAHHHHHH---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14860 for 636 contacts (-23.4/contact) +
2D Compatibility (PS) -9876 + (NN) -7209 + (LL) 14532
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -25463.0 ( -40.04 by residue)
QMean score : 0.620
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