Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKTQALIEQYSKSLVEVAIEHKIVEKIQQEVAALIDIFETSELEGVLSSLAVSHDEKQHFVKTLQT-SCSTYLVNFLEVIVQNEREALLYPILKSVDQEL-IKVNGQYPIQITTAVALSPEQKERLFDIAKTKLALPNGQLVEHIDPSIVGGFVVNANNKVIDASVRNQLHQFKMKLK
3TUF Chain:A ((123-216))
-------------------------------------------ELNAIVSSDDATAKEKSEAYDKMTALSEVEGTEKQLETLIKTQ----------GYEDALVNAEGDKINITVKS-DKHSKSKATAIIDLVAKEIK-TMKDVAVTFEP-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16846 for 551 contacts (-30.6/contact) +
2D Compatibility (PS) -9683 + (NN) -1326 + (LL) 8600
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -21955.0 ( -39.85 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3TUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TUF-query.scw
PDB file :
Tito_Scwrl_3TUF.pdb
: