Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1UX1 Chain:D ((1-125))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNHAEQTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSED
General information:
TITO was launched using:
RESULT:
Template:
1UX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55174 for 1004 contacts (-55.0/contact) +
2D Compatibility (PS) -13752 + (NN) -5848 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3250
Total energy: -86824.0 ( -86.48 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1UX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX1-query.scw
PDB file :
Tito_Scwrl_1UX1.pdb
: