Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLYYFIYLIKVIGNGLKLSLICGLNWLIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRMKTPLFLGVMYVFFLAGNSYIKAHLLTEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLKKVIDKEYLGIRKFTDSLPPEINLYKDADEEDADKRMRLINQNVIKHPYQEVVELSFLNREVITAIGYKAVPFEKETERTFIDD----DTIYYPIFTVHPFRNLEGKSDFYHILMKLKLSRKAAFTKNGERLLIRDF |
2GZ4 Chain:A ((6-205)) | ---------------------SPRAWQR--MLSGR-------------RLDLLDPSPLDVEIADIAHGLA-----------------------------RVARWNGQTRGDHAFTVAQHCLIVETIFCRMCP---GATPDEMQMALLHD-APEYVIG-----DMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRDMFDIIPLPSTEAQRLFIARFEAIETLRVTRTGG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76282 for 1496 contacts (-51.0/contact) +
2D Compatibility (PS) -20451 + (NN) -8685 + (LL) 8476
1D Compatibility (HY) 4000 + (ID) 1150
Total energy: -94092.0 ( -62.90 by residue)
QMean score : 0.227
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