Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYYFIYLIKVIGNGLKLSLICGLNWLIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRMKTPLFLGVMYVFFLAGNSYIKAHLLTEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLKKVIDKEYLGIRKFTDSLPPEINLYKDADEEDADKRMRLINQNVIKHPYQEVVELSFLNREVITAIGYKAVPFEKETERTFIDD----DTIYYPIFTVHPFRNLEGKSDFYHILMKLKLSRKAAFTKNGERLLIRDF
2GZ4 Chain:A ((6-205))---------------------SPRAWQR--MLSGR-------------RLDLLDPSPLDVEIADIAHGLA-----------------------------RVARWNGQTRGDHAFTVAQHCLIVETIFCRMCP---GATPDEMQMALLHD-APEYVIG-----DMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRDMFDIIPLPSTEAQRLFIARFEAIETLRVTRTGG----------


General information:
TITO was launched using:
RESULT:

Template: 2GZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76282 for 1496 contacts (-51.0/contact) +
2D Compatibility (PS) -20451 + (NN) -8685 + (LL) 8476
1D Compatibility (HY) 4000 + (ID) 1150
Total energy: -94092.0 ( -62.90 by residue)
QMean score : 0.227

(partial model without unconserved sides chains):
PDB file : Tito_2GZ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GZ4-query.scw
PDB file : Tito_Scwrl_2GZ4.pdb: