Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKLLL-LIG--GLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQK--------------YLLLVSDSGD---ALDLEY------------FYSIQDLKKNKDLGKFETRKSQIEKPGGY----------NELENKEVPF-------EYFKNNIVYPKGKPNITFDDFIIGAMDTKELKK-LKVK-SYLLKHPETELKDITYELPTQSKLIKK |
| 2QNR Chain:A ((18-287)) | ----EFTLMVVGESGLGKSTLINSLFLSTVEIEVKLRLTVVDTPFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHNIKIYHLPFKEQTRLLKASIPFSVVGSNQLIEVRGRLYPWGVVEVENPEHN----DFLKLRTMLITHMQDLQEVTQDL----HYENFRSERLKR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2868 for 1001 contacts (-2.9/contact) +
2D Compatibility (PS) -17905 + (NN) -6318 + (LL) 1272
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -34369.0 ( -34.33 by residue)
QMean score : 0.200
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