Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTKQVQQSRELVLKEIMQSQGVTRTKACSILKELEEFGLFQFSDSGQFMLKVGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1MKM Chain:A ((4-249)) | MNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18562 for 345 contacts (-53.8/contact) +
2D Compatibility (PS) -5885 + (NN) -3080 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -31927.0 ( -92.54 by residue)
QMean score : 0.736
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