Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MSMDWETFLDPYIQTV-GELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVES----IQE-------KMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRH----------------------DMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKI------ALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR |
| 1BYG Chain:A ((15-276)) | GWALNMKELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIK-NDAQAFLAEASVMTQL-RHSNLVQLLGVIV--EEGLYIVTEYMAKGSLVDYLRSRG--------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG-------------------LLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25950 for 1175 contacts (-22.1/contact) +
2D Compatibility (PS) -18546 + (NN) -6964 + (LL) 2640
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -56220.0 ( -47.85 by residue)
QMean score : 0.194
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