Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKKMLFGSYDYHKISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK
1N6J Chain:G ((4-29))
----------SPKGSISEETKQKLKSAILSAQSAAN------------
General information:
TITO was launched using:
RESULT:
Template:
1N6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -735 for 110 contacts (-6.7/contact) +
2D Compatibility (PS) -2697 + (NN) 235 + (LL) 1928
1D Compatibility (HY) 1600 + (ID) 400
Total energy: -69.0 ( -0.63 by residue)
QMean score : 0.064
(partial model without unconserved sides chains):
PDB file :
Tito_1N6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N6J-query.scw
PDB file :
Tito_Scwrl_1N6J.pdb
: