Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANF---FGITKDNQFITP-LSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDK------FTEAGACGTAAVISPIGGIQNGD-DFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
| 3JZ6 Chain:B ((47-373)) | ---------------------IDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA-GFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112018 for 2528 contacts (-44.3/contact) +
2D Compatibility (PS) -33483 + (NN) -11430 + (LL) 1724
1D Compatibility (HY) -25200 + (ID) 6800
Total energy: -187207.0 ( -74.05 by residue)
QMean score : 0.472
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