Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMKVEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEILVEVMEHDGYDRVSIIDPS
1XZ8 Chain:B ((1-176))
MQKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYR-----------VPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSIHEK-
General information:
TITO was launched using:
RESULT:
Template:
1XZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107973 for 1260 contacts (-85.7/contact) +
2D Compatibility (PS) -16904 + (NN) -4996 + (LL) 892
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -153581.0 ( -121.89 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1XZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZ8-query.scw
PDB file :
Tito_Scwrl_1XZ8.pdb
: