Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHIKAENIIVSYDQKE-----IINNLSLSILNQKITTIIGANGCGKSTLLKALTRIHKIKDGTITIDGHDIA--HLPTKEIAKKIALLPQVLE---ATEGITVYELISYGRFPHQKYLGNLTNDDRSKIHWAMEMTNVA-QFANRDVDDLSGGQRQKVWIAMALAQDTDTIFLDEPTTYLDMNHQLEVLELLKKLNNETQKTIIMVLHDLNLSARYSDYLVAMKTGKIIYEGSPSQIMTKDIIKDIFKIDAHIIQDPISKQPVLLSYQLSTDQN |
| 4MKI Chain:A ((7-236)) | ---IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEE--TVFKDIAFG--PSN--LGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGLSVPQITSLARELRKRGVPIPPDVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146898 for 1739 contacts (-84.5/contact) +
2D Compatibility (PS) -23877 + (NN) -8216 + (LL) 644
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -196847.0 ( -113.20 by residue)
QMean score : 0.479
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