Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPNRKLRLEREKLAKEKG
1G39 Chain:B ((2-31))
---------------VSKLSQLQTELLAALLESGLSKEALIQALG-------
General information:
TITO was launched using:
RESULT:
Template:
1G39.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3730 for 120 contacts (31.1/contact) +
2D Compatibility (PS) -3411 + (NN) -3352 + (LL) 528
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -4005.0 ( -33.38 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1G39.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G39-query.scw
PDB file :
Tito_Scwrl_1G39.pdb
: