Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTFYEYPKCTTCRSAKKELTELGLTFEAIDIKSNPPKASLLKELLENSPY-DLKKFFNTSGNSYRELGLKDKFDDLTLDQALDLLASDGMLIKRPLLVKDNKILQIGY-RTKYKDLNLV
3F0I Chain:A ((5-119))
SVVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDS--QLSDDALFAAMAEHPKLIERPIVVCNGQ-ARHGRPPEQVLEIL--
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44298 for 853 contacts (-51.9/contact) +
2D Compatibility (PS) -12338 + (NN) -6547 + (LL) 628
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -70255.0 ( -82.36 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: