Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVFSVKTFNNINQIGLQELGN-RFQID---G------D----MSENPDAYIIRSQ-NLHNQDF--PSNLKAIARAGAGTNNIPIEEASAQGIVVFNTPGANANAVKEAVIAALLLSARDYLGANRWVNTLTGTDIPKQIEAGKKAFAGNEIAGKKLGVIGLGAIGARIANDARRLGMTVLGYDPYVSIETAWNISSHVQRVKEIKDIFETCDYITIHVPLTNETKHTFDAEAFSIMKKGTTIINFARAELVNNQELFKAIETGVVKRYITDFGD----KELLNQKGITVFPHVGGSTDEAELNCAIMASQTIRCFMETGEITNSVNFPNVHQIQTAPFRITLINKNVPNIVAKISTAVSELGINIDNIINRSKGDYAYTLIDLDET--DNNKISTLIEEFEGDENIVRVRLIAKQQ |
1SC6 Chain:A ((4-404)) | -KIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESI-RDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRG---------VGN-----SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-----GNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDV--DPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVA---EKALQAMKAIPGTIRARLLY--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198885 for 2992 contacts (-66.5/contact) +
2D Compatibility (PS) -40042 + (NN) -14397 + (LL) 1676
1D Compatibility (HY) -20800 + (ID) 4900
Total energy: -277348.0 ( -92.70 by residue)
QMean score : 0.532
|
|
|