Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNHKFLQVLKYEGVVSITSWTELAPHVTNTWNSYLTITDDQRILAPAAGMTHLENDLNNNSKIIMTLGSREVEGRDGYQGTGFRIEGTAKLLEAGSDFEIVKKKYPFLRKVLEVTPINVIQLL
3A6R Chain:D ((1-122))
MLPGTFFEVLKNQGVVAIATQGEDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNG-PGTGFLIRGSAAFRTDGPEFEAI-ARFKWARAALVITVVSAEQTL
General information:
TITO was launched using:
RESULT:
Template:
3A6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80315 for 910 contacts (-88.3/contact) +
2D Compatibility (PS) -12912 + (NN) -3034 + (LL) 156
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -107905.0 ( -118.58 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3A6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A6R-query.scw
PDB file :
Tito_Scwrl_3A6R.pdb
: