Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEILVLGAGYAGLKAVRNLQKQSG-DFHITLVDMNDYHYEATELHEVAAGSQPKEKITFPIKDVINTNKVNFMQDEVLKVDAENKTVTVK--NN--GELHYDYVVVALGFVSETFGIKGAMENALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFT-------------------------GIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILPMFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKEDEELKSITAGTIIWTTGVSGSPVMGESGF--DQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPFPTTAQIATRMGAHVAKNLLHQIKGEA-TEDFSYSPQGTVASVGN-THGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
| 3H8L Chain:A ((2-357)) | -TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF----------QGGNIAI-GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKK----GMLD-KVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIR-EHEIVDEK--G---NTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTV-------PKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYP-TIVCVADNPYE------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220321 for 2650 contacts (-83.1/contact) +
2D Compatibility (PS) -35238 + (NN) -13614 + (LL) 5528
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -280945.0 ( -106.02 by residue)
QMean score : 0.482
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