Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYN--KGAHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCSCPQAEVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEFSG-HKVLTLPS-HNGKLLASEVATYIETFYADGNYQHMVFPGMVYISHPTEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDTDVDFPTIAALSDVFYIGGTKM-GALAGEAVVFT-KKNRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTDDLYLKIGKHAIDLAEELKIILE-EKGYSFYL-KSPTNQQFVIVENTKLTDLAK-NVAYSFWEKYDDHHTVIRLATSWSTSREDVTALRNVL |
| 3WGC Chain:A ((5-335)) | -RYIDLRSDTVTQPTDAMRQCMLHAEVGD-DVYGEDPGVNALEAYGADLLGKE--AALFVPSGTMSNLLAVMSHCQRGEGAVLGSAAHIYRYEAQGSAVLGSVALQPVPMQADGSLALADVRAAIAPD-----DVYFTPTRLVCLEN-THNGKVLPLPYLREMRELVDEHGLQLHLDGARLFNAVVASGHTVRE--LVAPFDSVSICLSKGLGAP--VGSLLVGSHAFIARARRLRKMVGGGMRQAGILAQAGLFALQQ--HVVRLADDHRRARQLAEGLAAL------LAQVQTNMVFLQ--APLLAFMKARGILFS---------GELRLVTHLQIHDDDIEEVIDAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179264 for 2690 contacts (-66.6/contact) +
2D Compatibility (PS) -33308 + (NN) -8943 + (LL) 1360
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -230105.0 ( -85.54 by residue)
QMean score : 0.515
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