Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRTDAQVDATKENLEKEGIPVQGKDHLLFLKKGMKSKESRRQAVQKDTNLIMLFGDNLVDFA-DFSKSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKHLDV-QKQLKERQKMLHSYD |
2I33 Chain:A ((14-250)) | ----------------------------------------------------VKLTDQQLMADLWYQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKEKGKEKRRELVSQTHDIVLFFGDNLSDFTGFDG-KSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEGALYDYNFKKSDAEKDKIRHDNLKSFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21299 for 1824 contacts (-11.7/contact) +
2D Compatibility (PS) -25860 + (NN) -16911 + (LL) 3852
1D Compatibility (HY) -16000 + (ID) 5350
Total energy: -81568.0 ( -44.72 by residue)
QMean score : 0.499
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