Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKRLPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICCATIPTMEAALKAIKEERGDRGEIQIELYGDWTYEQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLSTDTLQLFEGVDVFTFIAGRGITEADDPAAAARAFKDEIKRIWG
1Q6Q Chain:B ((3-215))
----LPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGD---VQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELW-
General information:
TITO was launched using:
RESULT:
Template:
1Q6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149812 for 1834 contacts (-81.7/contact) +
2D Compatibility (PS) -23162 + (NN) -9340 + (LL) 284
1D Compatibility (HY) -19200 + (ID) 5350
Total energy: -206580.0 ( -112.64 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1Q6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q6Q-query.scw
PDB file :
Tito_Scwrl_1Q6Q.pdb
: