Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAV-DAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFPDG--KEVSVLLALAATSS--AIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
2A0J Chain:A ((2-147))
-SLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADVFECLFARE-KLGST-GLGQGVAIPHGRHA-GVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENATGEHLE-VLSKLAGKFSQKSIRESLMTVSSAEEVRAILT---------------
General information:
TITO was launched using:
RESULT:
Template:
2A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100781 for 1089 contacts (-92.5/contact) +
2D Compatibility (PS) -14639 + (NN) -440 + (LL) 1184
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -123876.0 ( -113.75 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_2A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0J-query.scw
PDB file :
Tito_Scwrl_2A0J.pdb
: