Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIKELITKQKTWEIILLVV------------SGILIP---VILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGNMKQAITEIIISQIKKVETHIPDIQLDGGFYEKFQKYLLIGYNNGNIESKVETIRLQVCSVE--QNTFCENLIDEIFSDDKIIDSGSVESIFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAGPGVEKL---PLIDITKDVTKATAKTHQILEQG----ANQVGFNILVDRTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK |
| 4LK4 Chain:A ((10-350)) | RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVII-GAYDLNNSSQGERIAAQKIYRHL---SYSPSNLLN------DIAIVELAQTSSLPAITLAGPATRTSLPALTPLTVAGWGITF---TPILQEVDVDLVSQSLCQIVMQHGISSDP--NSTNFCAARLTQGDAGGPIVVKTGR-EQLGIVSW---GDEQGTYGVYTNVSYFRDWITKHTNQLSYDQVANLGIRPLGKVSQSFTYTNLDANALTYTGNTFSSLPADFSVLSD-GCSTK--VTLATG-----ESCSVEVAVDAQHYR---------------QYQYDFELIFSYAG-GSKRATSRIQLDT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71675 for 2439 contacts (-29.4/contact) +
2D Compatibility (PS) -31866 + (NN) 1035 + (LL) 5172
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -110434.0 ( -45.28 by residue)
QMean score : 0.160
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